diff options
-rw-r--r-- | .SRCINFO | 15 | ||||
-rw-r--r-- | PKGBUILD | 33 |
2 files changed, 48 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..e28ca816029b --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,15 @@ +pkgbase = rseg + pkgdesc = The RSEG software package is aimed to analyze ChIP-Seq data, especially for identifying genomic regions and their boundaries marked by diffusive histone modification markers, such as H3K36me3 and H3K27me3. + pkgver = 0.4.4 + pkgrel = 1 + url = http://smithlabresearch.org/software/rseg/ + arch = x86_64 + arch = i686 + license = GPL3 + makedepends = gsl + depends = gsl + source = http://smithlabresearch.org/downloads/rseg-0.4.4.tar.gz + sha256sums = 6b23b570097d449b910fba3244e0330729fa409995fbcc1b4890a99ee52891f2 + +pkgname = rseg + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..125d9b575e6f --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,33 @@ +# Maintainer: Sauliusl <luksaulius[at]gmail[dot]com> +pkgname=rseg +pkgver=0.4.4 +pkgrel=1 +pkgdesc="The RSEG software package is aimed to analyze ChIP-Seq data, especially for identifying genomic regions and their boundaries marked by diffusive histone modification markers, such as H3K36me3 and H3K27me3." +url="http://smithlabresearch.org/software/rseg/" +arch=('x86_64' 'i686') +license=('GPL3') +depends=('gsl') +optdepends=() +makedepends=('gsl') +conflicts=() +replaces=() +backup=() +install='' +source=("http://smithlabresearch.org/downloads/${pkgname}-${pkgver}.tar.gz") +sha256sums=('6b23b570097d449b910fba3244e0330729fa409995fbcc1b4890a99ee52891f2') + +build() { + cd "${srcdir}/${pkgname}-${pkgver}" + make + make install # This just puts files into bin/ directory +} + +package() { + cd "${srcdir}/${pkgname}-${pkgver}/bin" + install -d "${pkgdir}/usr/bin" + install -Dm755 * "${pkgdir}/usr/bin/" + # Rename the join utility so it does not clash with the one already in system + mv "${pkgdir}/usr/bin/join" "${pkgdir}/usr/bin/rseg-join" +} + +# vim:set ts=2 sw=2 et:
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