diff options
| -rw-r--r-- | .SRCINFO | 14 | ||||
| -rw-r--r-- | PKGBUILD | 31 |
2 files changed, 45 insertions, 0 deletions
diff --git a/.SRCINFO b/.SRCINFO new file mode 100644 index 000000000000..2821f25adf6f --- /dev/null +++ b/.SRCINFO @@ -0,0 +1,14 @@ +pkgbase = scythe-git + pkgdesc = A Bayesian adapter trimmer + pkgver = 133.20d3cff + pkgrel = 1 + url = https://github.com/vsbuffalo/scythe + arch = i686 + arch = x86_64 + license = custom + depends = zlib + source = scythe-git::git+https://github.com/vsbuffalo/scythe.git + md5sums = SKIP + +pkgname = scythe-git + diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..907e94930bc5 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,31 @@ +# Maintainer: Sauliusl <luksaulius[at]gmail[dot]com> +# Based on the pkgbuild for sickle +pkgname=scythe-git +pkgver='133.20d3cff' # At the time of packaging, overriden using the function below + +pkgrel=1 +pkgdesc="A Bayesian adapter trimmer" +arch=('i686' 'x86_64') +url="https://github.com/vsbuffalo/scythe" +license=('custom') +depends=('zlib') +source=('scythe-git::git+https://github.com/vsbuffalo/scythe.git') +md5sums=('SKIP') + +pkgver() { + # Based on awish-git + cd "${srcdir}/${pkgname}" + echo $(git rev-list --count HEAD).$(git rev-parse --short HEAD) +} + +build() { + cd "${srcdir}/${pkgname}" + make all; +} + +package() { + cd "${srcdir}/${pkgname}" + install -Dm755 scythe "${pkgdir}/usr/bin/scythe" + install -Dm644 LICENSE "${pkgdir}/usr/share/licenses/${pkgname}/LICENSE" + install -Dm644 illumina_adapters.fa "${pkgdir}/usr/share/scythe/illumina_adapters.fa" +}
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