diff options
| -rw-r--r-- | .SRCINFO | 25 | ||||
| -rw-r--r-- | PKGBUILD | 35 | ||||
| -rw-r--r-- | seaview.desktop | 2 |
3 files changed, 35 insertions, 27 deletions
@@ -1,21 +1,24 @@ pkgbase = seaview - pkgdesc = GUI for multiple sequence alignment and molecular phylogeny - pkgver = 5.0.4 - pkgrel = 2 + pkgdesc = GUI for multiple sequence alignment and molecular phylogeny. https://doi.org/10.1093/molbev/msp259 + pkgver = 5.0.5 + pkgrel = 8 url = http://doua.prabi.fr/software/seaview arch = x86_64 license = GPL3 - depends = shared-mime-info + makedepends = make + makedepends = gcc + makedepends = fltk depends = fltk - optdepends = clustal-omega: alignment - optdepends = muscle: alignment - optdepends = gblocks-bin: select blocks of evolutionarily conserved sites - source = http://doua.prabi.fr/software/seaview_data/seaview5-64.tgz + optdepends = clustal-omega + optdepends = muscle + optdepends = gblocks + optdepends = phyml + optdepends = bionj + source = https://doua.prabi.fr/software/seaview_data/seaview.tar.gz source = seaview.desktop source = seaview.png - md5sums = c22422d4da24da45a0aa8a3c35e941bf - md5sums = 43fa9e52949a5cd73f202af76e2cab56 + md5sums = 09f6800973308a91316bb820c4331cb0 + md5sums = e4cfc6d76819c5cd8e68ac93c2121557 md5sums = 337583df60b24d724d96e511a3f063ce pkgname = seaview - @@ -1,29 +1,34 @@ -# Maintainer: Steffen Weber <-boenki-gmx-de-> +# Maintainer: Guoyi Zhang <myname at malacology dot net> +# Contributor: Steffen Weber <-boenki-gmx-de-> # Contributor: Nick B <Shirakawasuna at gmail _dot_com> pkgname=seaview -pkgver=5.0.4 -pkgrel=2 -pkgdesc="GUI for multiple sequence alignment and molecular phylogeny" +pkgver=5.0.5 +pkgrel=8 +pkgdesc="GUI for multiple sequence alignment and molecular phylogeny. https://doi.org/10.1093/molbev/msp259" arch=('x86_64') url="http://doua.prabi.fr/software/seaview" license=('GPL3') -depends=('shared-mime-info') +depends=('fltk') +makedepends=('make' 'gcc' 'fltk') optdepends=('clustal-omega' 'muscle' - 'gblocks-bin' - 'phyml') -source=("http://doua.prabi.fr/software/seaview_data/seaview5-64.tgz" + 'gblocks' + 'phyml' + 'bionj') +source=("https://doua.prabi.fr/software/seaview_data/seaview.tar.gz" 'seaview.desktop' 'seaview.png') -md5sums=('c22422d4da24da45a0aa8a3c35e941bf' - '43fa9e52949a5cd73f202af76e2cab56' +md5sums=('09f6800973308a91316bb820c4331cb0' + 'e4cfc6d76819c5cd8e68ac93c2121557' '337583df60b24d724d96e511a3f063ce') +build(){ + cd $pkgname + make +} package() { - install -d "$pkgdir"/usr/{bin,share/{seaview,applications}} - install -m644 seaview.desktop "$pkgdir/usr/share/applications/" - mv "$srcdir"/seaview/* "$pkgdir"/usr/share/seaview - ln -s "$pkgdir"/usr/share/seaview/seaview "$pkgdir"/usr/bin/seaview - install -Dm 755 "$srcdir"/seaview.png "$pkgdir"/usr/share/seaview/seaview.png + install -Dm 755 "$srcdir"/$pkgname/$pkgname "$pkgdir"/usr/bin/$pkgname + install -Dm 644 seaview.desktop $pkgdir/usr/share/applications/seaview.desktop + install -Dm 755 "$srcdir"/seaview.png $pkgdir/usr/share/seaview/seaview.png } diff --git a/seaview.desktop b/seaview.desktop index 03f8c5d8014f..4e8efde423c9 100644 --- a/seaview.desktop +++ b/seaview.desktop @@ -5,7 +5,7 @@ Version=1.0 Terminal=false Icon=/usr/share/seaview/seaview.png -Exec=/usr/share/seaview/seaview %f +Exec=/usr/bin/seaview %f Name=SeaView GenericName=Multiple sequence alignment editor GenericName[en]=Multiple sequence alignment editor |