diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 13 |
1 files changed, 7 insertions, 6 deletions
@@ -1,23 +1,21 @@ -# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com> +# Maintainer: Christian Krause ("wookietreiber") <christian.krause@mailbox.org> pkgname=bcftools -pkgver=1.3.1 +pkgver=1.4 pkgrel=1 pkgdesc="Reading/writing BCF2/VCF/gVCF files and calling/filtering/summarising SNP and short indel sequence variants" arch=('i686' 'x86_64') url="http://samtools.github.io/bcftools/" license=('GPL') depends=('gsl' 'htslib') -source=(https://github.com/samtools/$pkgname/releases/download/$pkgver/$pkgname-$pkgver.tar.bz2 +source=(https://github.com/samtools/bcftools/releases/download/$pkgver/$pkgname-$pkgver.tar.bz2 makefile-system-htslib.patch) -md5sums=('575001e9fca37cab0c7a7287ad4b1cdb' - '3547e133251f4d088cb087019183efa7') prepare() { cd $srcdir/$pkgname-$pkgver # prevent shipped htslib to be used - rm -rf htslib-1.3.1 + rm -rf htslib-$pkgver # patch Makefile to make it work with a system-provided htslib patch -i $srcdir/makefile-system-htslib.patch @@ -40,3 +38,6 @@ package() { make prefix=/usr plugindir=/usr/lib/$pkgname USE_GPL=1 DESTDIR=$pkgdir install } + +md5sums=('50ccf0a073bd70e99cdb3c8be830416e' + 'baba7d2fc8947c7ec29ff4498637ea85') |