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-rw-r--r--PKGBUILD37
1 files changed, 37 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Matt Neilson <ichthyoboy at gmail dot com>
+# Contributor: Mick Elliot <micke at sfu dot ca>
+
+pkgname=clustalx
+pkgver=2.1
+pkgrel=5
+pkgdesc="Multiple alignment of nucleic acid and protein sequences"
+arch=('i686' 'x86_64')
+provides=('clustalx')
+url="http://www.clustal.org"
+license=('GPL3')
+depends=('qt4>=4.3')
+source=( "$url/download/${pkgver}/${pkgname}-${pkgver}.tar.gz"
+ "patch"
+ "QT.patch")
+
+md5sums=( '5b1f2f1cc8e939411ab0f934cafa072a'
+ '912b5f02ca1502f63636b089eb24f01e'
+ '564c8dcc0456e1bca230d2331369e6b5')
+
+build() {
+ cd "${srcdir}/${pkgname}-${pkgver}"
+ patch -p1 < ../QT.patch
+ patch -p1 < ../patch
+ sed -i 's/static//g' clustalx.pro
+ qmake
+ make
+}
+
+package() {
+ cd "${srcdir}/${pkgname}-${pkgver}"
+ install -D -m755 clustalx "${pkgdir}/usr/bin/clustalx"
+ install -D -m644 colprot.xml "${pkgdir}/usr/share/${pkgname}/colprot.xml"
+ install -D -m644 coldna.xml "${pkgdir}/usr/share/${pkgname}/coldna.xml"
+ install -D -m644 coldna.xml "${pkgdir}/usr/share/${pkgname}/colprint.xml"
+ install -D -m644 clustalx.hlp "${pkgdir}/usr/share/${pkgname}/clustalx.hlp"
+}