diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 20 |
1 files changed, 12 insertions, 8 deletions
@@ -3,29 +3,33 @@ # Contributor: florianbw <florian.bw gmail.com> pkgname=cytoscape -pkgver=3.10.1 +pkgver=3.10.2 pkgrel=1 pkgdesc="Network Data Integration, Analysis, and Visualization in a Box" arch=('any') url=https://www.cytoscape.org -license=('LGPL') +license=('LGPL-2.1-only') depends=('java-runtime=17' 'bash') optdepends=('opencl-driver: for OpenCL support') source=("https://github.com/cytoscape/cytoscape/releases/download/${pkgver}/cytoscape-unix-${pkgver}.tar.gz" "${pkgname}.desktop" "${pkgname}.png" - "${pkgname}") + "${pkgname}" + "0001-fix-cytoscape.vmoptions-file-location.patch" + "0002-fix-karaf-instances-dir.patch" +) -sha256sums=('7eac40b27a4c602623d215b6a31bbf347e0fa9eb119563ece5e0d27928f2d5a5' +sha256sums=('02b4fe83719bb52c6adc5bd18b51f8cff929b267050a62a1cc4248e1b08ae381' 'f4476545086f845e1cec5861169270da9f82a6ad4944972010827a567af0c7d0' '135faa3f0beb8ecc1b704cf376408e8bd5f62f32ba50a84002c14321d0bb0b68' - 'daf81142f560db93aeeea96ca185a2662dd0ec9ee220aee167bf826fc44f3dc3') + 'daf81142f560db93aeeea96ca185a2662dd0ec9ee220aee167bf826fc44f3dc3' + 'fadbacc92c147dead6f09577aedda08aca3a70c04386d91cbee2562739c5645b' + '4a65e776ab9092e5828b3c9299add0452b131e1665343bd10758399f67479f47') prepare() { cd ${pkgname}-unix-${pkgver} - sed -i 's#^\(vm_options_path\)=.*$#\1="\${HOME}/CytoscapeConfiguration"#' cytoscape.sh gen_vmoptions.sh - sed -i '/^LOCAL_CLASSPATH/a KARAF_INSTANCES="\${HOME}/CytoscapeConfiguration/instances"' framework/bin/karaf - sed -i 's#\${KARAF_HOME}/instances#\${KARAF_INSTANCES}#' framework/bin/karaf + patch -p1 -i ../0001-fix-cytoscape.vmoptions-file-location.patch + patch -p1 -i ../0002-fix-karaf-instances-dir.patch } package() { |