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-rw-r--r--PKGBUILD38
1 files changed, 38 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Joshua Hardy joshinsilico
+pkgname=molprobity-git
+pkgver=r1013.ee5bdd4
+pkgrel=1
+pkgdesc="All-atom structure validation for macromolecular crystallography"
+arch=('any')
+url="http://molprobity.biochem.duke.edu/"
+license=('BSD')
+depends=('python' 'php' 'lib32-libxext' 'java-environment' 'ucsf-chimera' 'lib32-gcc-libs' 'boost-libs' 'tcsh' 'lib32-libxt')
+makedepends=('python2' 'git' 'subversion' 'curl' 'tar' 'make' 'gawk')
+provides=("${pkgname%-VCS}")
+conflicts=("${pkgname%-VCS}")
+options=('!strip')
+source=('molprobity-git::git+https://github.com/rlabduke/MolProbity#branch=molprobity_4.2')
+md5sums=('SKIP')
+
+pkgver() {
+ cd "$srcdir/${pkgname%-VCS}"
+ printf "r%s.%s" "$(git rev-list --count HEAD)" "$(git rev-parse --short HEAD)"
+}
+
+prepare() {
+ cd "$srcdir/${pkgname%-VCS}"
+ sed -i -e s:"python ../sources/cctbx_project/libtbx/configure.py mmtbx":"python2 ../sources/cctbx_project/libtbx/configure.py mmtbx":g configure.sh
+}
+
+build() {
+ cd "$srcdir/${pkgname%-VCS}"
+ ./configure.sh
+ ./setup.sh
+}
+
+package() {
+ cd "$srcdir/${pkgname%-VCS}"
+ install -d "${pkgdir}"/opt/MolProbity "${pkgdir}"/usr/share/licenses/molprobity-git
+ cp -r * "${pkgdir}"/opt/MolProbity/.
+ cp LICENSE.html "${pkgdir}"/usr/share/licenses/molprobity-git/.
+}