diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 13 |
1 files changed, 5 insertions, 8 deletions
@@ -2,7 +2,7 @@ # Maintainer: Aaron Baker <aa{last name}99{at}gmail{dt}org> pkgname=ncbi-vdb -pkgver=2.5.7 +pkgver=2.5.8 pkgrel=1 pkgdesc="The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives." arch=('x86_64') @@ -10,14 +10,11 @@ url="https://github.com/ncbi/ncbi-vdb" depends=('libxml2' 'ngs' 'hdf5') provides=('ncbi-vdb') license=('custom:PublicDomain') -source=("https://github.com/ncbi/ncbi-vdb/archive/$pkgver.tar.gz" "$pkgname.patch") -sha256sums=('e088717270a48f070d5aeb633558e778081c70e5c42e5e621d6a5b8f3c2c5e41' '19f09b19cad2ebd4df4185022e711f9bc32898926168d234833e56d70c2d2029') +source=("https://github.com/ncbi/ncbi-vdb/archive/$pkgver.tar.gz") +sha256sums=('7a0ccc3434220e5288a016e4a9e24d4a1deae2a7d5de594fc94b2442172b3229') prepare(){ cd "${pkgname}-${pkgver}" - # ncbi build process frequently checks if we are root user which interferes - # with makepkg use of fakeroot - patch -p1 -i "$srcdir/$pkgname.patch" } build(){ @@ -50,6 +47,6 @@ package(){ # TODO without this a link from libncbi-vdb-static.a -> libncbi-vdb.a is dead because # libncbi-vdb.a gets removed somehow?? cd "$pkgdir/usr/lib/" - ln -sf libncbi-vdb.a.2.5.7 libncbi-vdb-static.a - ln -sf libncbi-wvdb.a.2.5.7 libncbi-wvdb-static.a + ln -sf "libncbi-vdb.a.$pkgver" libncbi-vdb-static.a + ln -sf "libncbi-wvdb.a.$pkgver" libncbi-wvdb-static.a } |