diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 16 |
1 files changed, 9 insertions, 7 deletions
@@ -4,7 +4,7 @@ pkgname=ngs pkgver=2.9.6 -pkgrel=1 +pkgrel=2 pkgdesc="A new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing." arch=('x86_64') url="https://github.com/ncbi/ngs" @@ -25,20 +25,22 @@ prepare(){ build(){ cd "${pkgname}-${pkgver}" ./configure --prefix="$pkgdir/usr/" --build-prefix="$srcdir/build" - make + make -C ngs-sdk + make -C ngs-java } -check(){ - cd "${pkgname}-${pkgver}" - make -k test -} +#check(){ +# cd "${pkgname}-${pkgver}" +# make -k test +#} package(){ cd "$pkgname-$pkgver" # ncbi does not use autoconf/automake so there is no respect for DESTDIR # but there is a ROOT(dir) #make "ROOT=$pkgdir" install - make install + make -C ngs-sdk install + make -C ngs-java install # add license mkdir -p "$pkgdir/usr/share/licenses/${pkgname}" |