diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 26 |
1 files changed, 19 insertions, 7 deletions
@@ -1,18 +1,18 @@ # Maintainer: Lev Levitsky <levlev@mail.ru> pkgbase="percolator-git" pkgname=('percolator-git' 'percolator-converters-git' 'elude-git') -pkgver=3.02 +pkgver=3.02.01.r8.gf97ae1d pkgrel=1 pkgdesc="Software for postprocessing of shotgun proteomics data + format converters + Elude tool" url="http://percolator.ms/" license=('Apache') -depends=('xerces-c' 'sqlite') +depends=('xerces-c' 'sqlite' 'libtirpc-compat' 'boost') arch=('x86_64') -makedepends=('git' 'xsd' 'cmake' 'boost' 'zlib') +makedepends=('git' 'xsd' 'cmake' 'zlib') source=('source::git+https://github.com/percolator/percolator' 'percolator.patch') md5sums=('SKIP' - '4e1432640f09fa3dc2f3d9894ec380f4') + '53c592a9db82da8474907a617ea688fb') pkgver() { cd "${srcdir}/source" @@ -34,19 +34,31 @@ build() { echo "------------------------" echo "Building percolator ..." echo "------------------------" - cmake -DTARGET_ARCH=amd64 -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/usr -DXML_SUPPORT=ON "${srcdir}/source" + echo "Running cmake for percolator ..." + echo "................................" + cmake -DTARGET_ARCH=x86_64 -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=/usr -DXML_SUPPORT=ON "${srcdir}/source" + echo "Running make for percolator ..." + echo "..............................." make echo "------------------------" echo "Building converters ..." echo "------------------------" cd "../${pkgname[1]%-git}" - cmake -DTARGET_ARCH=amd64 -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=Release "${srcdir}/source/src/converters" + echo "Running cmake for percolator-converters ..." + echo "..........................................." + cmake -DTARGET_ARCH=x86_64 -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=Release "${srcdir}/source/src/converters" + echo "Running make for percolator-converters ..." + echo ".........................................." make echo "------------------------" echo "Building Elude ..." echo "------------------------" cd "../${pkgname[2]%-git}" - cmake -DTARGET_ARCH=amd64 -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=Release "${srcdir}/source/src/elude_tool" + echo "Running cmake for elude ..." + echo "..........................." + cmake -DTARGET_ARCH=x86_64 -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=Release "${srcdir}/source/src/elude_tool" + echo "Running make for elude ..." + echo ".........................." make } |