diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..c144b7ad2aa7 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,27 @@ +# Maintainer: Malacology <guoyizhang at malacology dot com> +# Contributor: Malacology <guoyizhang at malacology dot com> + +pkgname=phylonet +_installname=PhyloNet +pkgver=3.8.2 +pkgrel=1 +depends=( + 'jre-openjdk-headless' + 'jre-openjdk' + 'jdk-openjdk' + 'openjdk-doc' + 'openjdk-src' +) +pkgdesc="TA suite of software tools for reconstructing/analyzing phylogenetic networks in the presence of reticulate evolutionary events" +arch=('x86_64') +url="https://bioinfocs.rice.edu/PhyloNet" +license=('GPL2') +source=("https://bioinfocs.rice.edu/sites/g/files/bxs266/f/kcfinder/files/PhyloNet_3.8.2.jar") +sha256sums=('0aa9c0e90c751ba14202e193f415d415fd9586a9a2b74c9fb22bbcaf306168d0') + +package() { + install -dm755 "$pkgdir"/usr/{bin,share/phylonet} + install -Dm644 ${srcdir}/${_installname}_${pkgver}.jar ${pkgdir}/usr/share/phylonet/${_installname}.jar + ln -s /usr/share/phylonet/${_installname}.jar ${pkgdir}/usr/bin/${_installname}.jar +} + |