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-rw-r--r--PKGBUILD9
1 files changed, 7 insertions, 2 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 81b91872d62e..ddcf26e4f4d6 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -2,7 +2,7 @@
pkgname=proovread
pkgver=2.12
-pkgrel=3
+pkgrel=4
pkgdesc="large-scale high accuracy PacBio correction through iterative short read consensus"
arch=('i686' 'x86_64')
url="https://github.com/BioInf-Wuerzburg/proovread"
@@ -28,6 +28,9 @@ prepare() {
bin/proovread \
bin/sam2cns \
bin/test_cfg.pl
+
+ sed -e 's|$RealBin/../sample|/usr/share/proovread/sample|' \
+ -i bin/proovread
}
build() {
@@ -49,7 +52,7 @@ package() {
mkdir -p $pkgdir/usr/bin \
$pkgdir/usr/lib/perl5/vendor_perl \
- $pkgdir/usr/share/proovread
+ $pkgdir/usr/share/proovread/sample
for file in bin/* util/SeqChunker/bin/* util/bwa/bwa-proovread ; do
install -Dm755 $file $pkgdir/usr/bin/$(basename $file .pl)
@@ -58,4 +61,6 @@ package() {
cp -r lib/* $pkgdir/usr/lib/perl5/vendor_perl
install -Dm644 proovread.cfg $pkgdir/usr/share/proovread/proovread.cfg
+
+ cp sample/* $pkgdir/usr/share/proovread/sample
}