diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 8 |
1 files changed, 5 insertions, 3 deletions
@@ -4,13 +4,11 @@ _name=pybedtools pkgbase='python-pybedtools-git' pkgname=('python-pybedtools-git' 'python2-pybedtools-git') pkgver=0.7.10.r25.g9ab3ff6 -pkgrel=1 +pkgrel=2 pkgdesc="Python wrapper for the bioinformatics genomic arithmetic tool bedtools" arch=('any') url="https://pypi.python.org/pypi/pybedtools" license=('GPL2') -provides=('python-pybedtools') -conflicts=('python-pybedtools') makedepends=( 'python' 'python-setuptools' 'cython' 'python2' 'python2-setuptools' 'cython2') @@ -47,6 +45,8 @@ package_python2-pybedtools-git() { 'htslib: for working with SAM/BAM/CRAM files' 'python2-matplotlib: for plotting genomic intervals' 'ucsc-kent-genome-tools: for bedgraph to bigwig conversions') + provides=('python2-pyvcf') + conflicts=('python2-pyvcf') cd "${_name}"-"${pkgver}"-py2 python2 setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build @@ -72,6 +72,8 @@ package_python-pybedtools-git() { 'htslib: for working with SAM/BAM/CRAM files' 'python-matplotlib: for plotting genomic intervals' 'ucsc-kent-genome-tools: for bedgraph to bigwig conversions') + provides=('python-pyvcf') + conflicts=('python-pyvcf') cd "${_name}"-"${pkgver}" python setup.py install --root="${pkgdir}"/ --optimize=1 --skip-build |