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-rw-r--r--PKGBUILD36
1 files changed, 36 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
+
+_pkgname=cutadapt
+pkgname=python2-$_pkgname
+pkgver=1.8
+pkgrel=1
+pkgdesc='trim adapters from high-throughput sequencing reads'
+arch=('i686' 'x86_64')
+url="http://code.google.com/p/$_pkgname/"
+license=('custom')
+depends=('python2')
+source=("https://pypi.python.org/packages/source/c/$_pkgname/$_pkgname-$pkgver.tar.gz")
+md5sums=('73cc9c52d1b14883c24a4c29b16e0b61')
+provides=('cutadapt')
+conflicts=('python-cutadapt')
+
+prepare() {
+ cd $srcdir/$_pkgname-$pkgver
+
+ sed -e 's|#!/usr/bin/env python|#!/usr/bin/env python2|' \
+ -i cutadapt/scripts/cutadapt.py
+}
+
+package() {
+ cd $srcdir/$_pkgname-$pkgver
+
+ python2 setup.py build
+}
+
+package() {
+ cd $srcdir/$_pkgname-$pkgver
+
+ python2 setup.py install --root=$pkgdir --optimize=1
+
+ install -Dm644 LICENSE $pkgdir/usr/share/licenses/$pkgname/LICENSE
+}