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Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 43 |
1 files changed, 43 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..366cd7f4a9fa --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,43 @@ +# Maintainer: Jie Zhu <lovelornpig@gmail.com> +# Developers: Olivier Delaneau <olivier.delaneau@gmail.com> +# Halit Ongen <halit.ongen@unige.ch> +# please see: https://github.com/qtltools/qtltools + +_basename="qtltools" +pkgname=${_basename}-git +pkgver=1.1.72.dd02b8e +pkgrel=1 +pkgdesc="A complete tool set for molecular QTL discovery and analysis" +arch=('i686' 'x86_64') +url="https://github.com/alienzj/qtltools" +license=('GPLV3') +depends=('boost' 'bzip2' 'gzip' 'zip' 'gsl' 'cblas' 'blas' 'htslib' 'r') +provides=(${_basename}=${pkgver}) +conflicts=(${_basename}) +source=(${_basename}::git+https://github.com/alienzj/qtltools.git) +md5sums=('SKIP') + +prepare() { + cd "${srcdir}/${_basename}" + echo "0.1.r$(git rev-list --count HEAD).$(git rev-parse --short HEAD)" +} + +build() { + cd "${srcdir}/${_basename}" + + if [[ -d build ]]; then + rm -rf build + fi + mkdir build && cd build + + cmake -DCMAKE_INSTALL_PREFIX="/usr" .. + make +} + +package() { + cd "${srcdir}/${_basename}/build" + make install DESTDIR="${pkgdir}/" + + install -D -m644 "${srcdir}/${_basename}/README" \ + "${pkgdir}/usr/share/doc/${_basename}/README" +} |