diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 50 |
1 files changed, 27 insertions, 23 deletions
@@ -3,39 +3,43 @@ # Contributor: Grey Christoforo <first name at last name dot net> _bcname=Biostrings -_bcver=2.66.0 +_bcver=2.68.1 + pkgname=r-${_bcname,,} -pkgver=${_bcver//[:-]/.} -pkgrel=2 pkgdesc="Efficient manipulation of biological strings" -arch=(i686 x86_64) url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html" +pkgver=${_bcver//[:-]/.} +pkgrel=1 + +arch=(i686 x86_64) license=(Artistic2.0) + depends=( "r>=4.0.0" - "r-biocgenerics>=0.37.0" - "r-s4vectors>=0.27.12" - "r-iranges>=2.23.9" - "r-xvector>=0.29.2" - r-genomeinfodb - r-crayon + "r-biocgenerics>=0.37.0" + "r-crayon" + "r-genomeinfodb" + "r-iranges>=2.31.2" + "r-s4vectors>=0.27.12" + "r-xvector>=0.37.1" ) optdepends=( - r-bsgenome - r-bsgenome.celegans.ucsc.ce2 - r-bsgenome.dmelanogaster.ucsc.dm3 - r-bsgenome.hsapiens.ucsc.hg18 - r-drosophila2probe - r-hgu95av2probe - r-hgu133aprobe - r-genomicfeatures - r-hgu95av2cdf - r-affy - r-affydata - r-runit + "r-affy>=1.41.3" + "r-affydata>=1.11.5" + "r-bsgenome.celegans.ucsc.ce2>=1.3.11" + "r-bsgenome.dmelanogaster.ucsc.dm3>=1.3.11" + "r-bsgenome.hsapiens.ucsc.hg18" + "r-bsgenome>=1.13.14" + "r-drosophila2probe" + "r-genomicfeatures>=1.3.14" + "r-hgu133aprobe" + "r-hgu95av2cdf" + "r-hgu95av2probe" + "r-runit" ) + source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz") -sha256sums=('7312c508bc2fe6ea3da75edd621b41a35929f9dbdca16d25eb3724ca2cd206fd') +b2sums=("82478d065bb98544bd4aadc35a18feeed9b6e016e89384dfedc9473d3e2fafbbb8618977efefa21c337902087ef967526edf1805b40ebc9c365cde83ede9c7eb") build() { R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l "${srcdir}" |