diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 33 |
1 files changed, 21 insertions, 12 deletions
@@ -1,41 +1,50 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=celldex -_pkgver=1.12.0 +_pkgver=1.14.0 pkgname=r-${_pkgname,,} -pkgver=1.12.0 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Reference Index for Cell Types' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('GPL') +pkgdesc="Index of Reference Cell Type Datasets" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('GPL-3.0-only') depends=( - r + r-alabaster.base + r-alabaster.matrix + r-alabaster.se r-annotationdbi r-annotationhub + r-dbi r-delayedarray r-delayedmatrixstats r-experimenthub + r-gypsum + r-jsonlite + r-rsqlite r-s4vectors r-summarizedexperiment ) optdepends=( + r-biocmanager r-biocstyle r-dt r-ensembldb + r-jsonvalidate r-knitr r-rmarkdown r-testthat ) source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('94db251d15b86c1ff26be9a285640811cfb1abda6d7819b96e3cbcc4636d72b2') +md5sums=('184b9a4161cbccf6cbd33ab6d38d2c74') +b2sums=('46d80d3bb1695a0eb4babf4eb86218e65e32e09f3cd377b68696ede31675313edd685c9edac648b612ace266cda89cf8fbbf1af2455aa61edce3213799404001') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" } -# vim:set ts=2 sw=2 et: |