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-rw-r--r--PKGBUILD43
1 files changed, 43 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=cytoKernel
+_pkgver=1.2.0
+pkgname=r-${_pkgname,,}
+pkgver=1.2.0
+pkgrel=1
+pkgdesc='Differential expression using kernel-based score test'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+ r
+ r-ashr
+ r-biocparallel
+ r-circlize
+ r-complexheatmap
+ r-data.table
+ r-dplyr
+ r-magrittr
+ r-rcpp
+ r-rlang
+ r-s4vectors
+ r-summarizedexperiment
+)
+optdepends=(
+ r-biocstyle
+ r-knitr
+ r-rmarkdown
+ r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('d563a0f2c33d5bdec026962b0376c15d7bee3ad650176035e67c0dde687d89c0')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: