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Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 43 |
1 files changed, 43 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..668545793c1c --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,43 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=cytoKernel +_pkgver=1.2.0 +pkgname=r-${_pkgname,,} +pkgver=1.2.0 +pkgrel=1 +pkgdesc='Differential expression using kernel-based score test' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-ashr + r-biocparallel + r-circlize + r-complexheatmap + r-data.table + r-dplyr + r-magrittr + r-rcpp + r-rlang + r-s4vectors + r-summarizedexperiment +) +optdepends=( + r-biocstyle + r-knitr + r-rmarkdown + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('d563a0f2c33d5bdec026962b0376c15d7bee3ad650176035e67c0dde687d89c0') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |