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Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..fc81d2c14fad --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,20 @@ +# Maintainer: Charles Vejnar + +pkgname=r-deseq2 +_bc_name=DESeq2 +pkgver=1.22.2 +pkgrel=1 +pkgdesc="Differential gene expression analysis based on the negative binomial distribution." +url="https://bioconductor.org/packages/release/bioc/html/DESeq2.html" +arch=("x86_64") +license=("LGPL3") +depends=("r" "r-s4vectors" "r-iranges" "r-genomicranges" "r-summarizedexperiment") +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bc_name}_${pkgver}.tar.gz") +sha1sums=("03cfc4d91daab8207ff84a798bf9e4b7f1f172cf") + +package() { + mkdir -p $pkgdir/usr/lib/R/library + cd $srcdir + + R CMD INSTALL -l $pkgdir/usr/lib/R/library ./${_bc_name} +} |