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-rw-r--r--PKGBUILD26
1 files changed, 15 insertions, 11 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 35a6ee2f5ba9..81fed600b66b 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,20 +1,24 @@
-# Maintainer: Charles Vejnar
+# Maintainer: Charles Vejnar <first name [dot] last name [at] gmail [dot] com>
-pkgname=r-deseq2
-_bc_name=DESeq2
-pkgver=1.34.0
+_pkgname=DESeq2
+pkgname=r-${_pkgname,,}
+pkgver=1.36.0
pkgrel=1
pkgdesc="Differential gene expression analysis based on the negative binomial distribution."
-url="https://bioconductor.org/packages/release/bioc/html/DESeq2.html"
+url="https://bioconductor.org/packages/DESeq2"
arch=("x86_64")
license=("LGPL3")
-depends=("r" "r-s4vectors" "r-iranges" "r-genomicranges" "r-summarizedexperiment")
-source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bc_name}_${pkgver}.tar.gz")
-sha1sums=("2316fc43f8a114cb515998a39fc2a46ed4a6a07a")
+depends=('r'
+ 'r-s4vectors'
+ 'r-iranges'
+ 'r-genomicranges'
+ 'r-summarizedexperiment')
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${pkgver}.tar.gz")
+sha1sums=('5a2890897a509174af3a95030fc50658cdc8e2fe')
package() {
- mkdir -p $pkgdir/usr/lib/R/library
- cd $srcdir
+ mkdir -p "$pkgdir/usr/lib/R/library"
+ cd "$srcdir"
- R CMD INSTALL -l $pkgdir/usr/lib/R/library ./${_bc_name}
+ R CMD INSTALL -l "$pkgdir/usr/lib/R/library" ./${_pkgname}
}