summarylogtreecommitdiffstats
path: root/PKGBUILD
diff options
context:
space:
mode:
Diffstat (limited to 'PKGBUILD')
-rw-r--r--PKGBUILD12
1 files changed, 10 insertions, 2 deletions
diff --git a/PKGBUILD b/PKGBUILD
index 229c0184fdcc..ccecb8e025b8 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,7 +3,7 @@
_pkgname=DESeq2
pkgname=r-${_pkgname,,}
pkgver=1.42.0
-pkgrel=1
+pkgrel=2
pkgdesc="Differential gene expression analysis based on the negative binomial distribution."
url="https://bioconductor.org/packages/DESeq2"
arch=("x86_64")
@@ -12,7 +12,15 @@ depends=('r'
'r-s4vectors'
'r-iranges'
'r-genomicranges'
- 'r-summarizedexperiment')
+ 'r-summarizedexperiment'
+ 'r-biobase'
+ 'r-biocgenerics'
+ 'r-biocparallel'
+ 'r-ggplot2'
+ 'r-locfit'
+ 'r-matrixstats'
+ 'r-rcpp')
+makedepends=('r-rcpparmadillo')
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${pkgver}.tar.gz")
sha256sums=('2af89dce722843a3824f9637419d98dae0052122b30e23b7fc811cca36d8e7d7')