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Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..603b2d30643a --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,37 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=DEsingle +_pkgver=1.16.0 +pkgname=r-${_pkgname,,} +pkgver=1.16.0 +pkgrel=1 +pkgdesc='DEsingle for detecting three types of differential expression in single-cell RNA-seq data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-bbmle + r-biocparallel + r-gamlss + r-maxlik + r-pscl + r-vgam +) +optdepends=( + r-knitr + r-rmarkdown + r-singlecellexperiment +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('f3838ccc43eba65df7b638fc1a3b34e0edeaf67ebab0db6eb0568290f0fa823f') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |