diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 42 |
1 files changed, 25 insertions, 17 deletions
@@ -1,21 +1,21 @@ # Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=escape -_pkgver=1.12.0 +_pkgver=2.0.0 pkgname=r-${_pkgname,,} -pkgver=1.12.0 +pkgver=${_pkgver//-/.} pkgrel=1 -pkgdesc='Easy single cell analysis platform for enrichment' -arch=('any') -url="https://bioconductor.org/packages/${_pkgname}" -license=('Apache') +pkgdesc="Easy single cell analysis platform for enrichment" +arch=(any) +url="https://bioconductor.org/packages/$_pkgname" +license=('MIT') depends=( - r + r-aucell r-biocparallel - r-broom - r-data.table r-dplyr + r-ggdist r-ggplot2 + r-ggpointdensity r-ggridges r-gseabase r-gsva @@ -23,7 +23,7 @@ depends=( r-msigdbr r-patchwork r-reshape2 - r-rlang + r-seuratobject r-singlecellexperiment r-stringr r-summarizedexperiment @@ -31,23 +31,31 @@ depends=( ) optdepends=( r-biocstyle - r-dittoseq + r-hexbin r-knitr r-markdown + r-rcolorbrewer + r-rlang r-rmarkdown + r-scran r-seurat - r-seuratobject + r-spelling r-testthat + r-vdiffr ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") -sha256sums=('d69dda267e9346b1d3f10274fb0985409d23060abba609d4e8859eae92b1b12e') +md5sums=('7b3c16032574ae1639cf3d8b0f4eda1a') +b2sums=('85b0342930e2971515787fbd0739062c8a8faecb6a8bb7a73b93c9fe8c79994c90a4b8fa3f3cf0919e155f3cd316d6afc15f5e55335cd49b93cbd7ebadacc5bd') build() { - R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" + mkdir build + R CMD INSTALL -l build "$_pkgname" } package() { - install -dm0755 "${pkgdir}/usr/lib/R/library" - cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -d "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" + + install -d "$pkgdir/usr/share/licenses/$pkgname" + ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname" } -# vim:set ts=2 sw=2 et: |