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-rw-r--r--PKGBUILD8
1 files changed, 5 insertions, 3 deletions
diff --git a/PKGBUILD b/PKGBUILD
index fc601f651f33..1c694ec3b8dd 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -3,14 +3,14 @@
# Contributor: Grey Christoforo <first name at last name dot net>
_bcname=GenomeInfoDb
-_bcver=1.38.7
+_bcver=1.38.8
pkgname="r-${_bcname,,}"
pkgver="${_bcver//[:-]/.}"
pkgrel=1
pkgdesc="Utilities for manipulating chromosome names, including modifying them to follow a particular naming style"
arch=("any")
url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html"
-license=("Artistic2.0")
+license=("Artistic-2.0")
depends=(
"r>=4.0.0"
@@ -26,6 +26,7 @@ optdepends=(
"r-bsgenome.celegans.ucsc.ce2"
"r-bsgenome.hsapiens.ncbi.grch38"
"r-bsgenome.scerevisiae.ucsc.saccer2"
+ "r-data.table"
"r-genomicalignments"
"r-genomicfeatures"
"r-genomicranges"
@@ -33,6 +34,7 @@ optdepends=(
"r-rsamtools"
"r-runit"
"r-txdb.dmelanogaster.ucsc.dm3.ensgene"
+ "r-r.utils"
)
# The unittests for `r-pkgcache` have circular
@@ -55,7 +57,7 @@ optdepends=(
# )
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz")
-b2sums=('2b015fdde7dacc64987a771ee031410b635cf917bd820abdc3a0d1d08b9fd4a8a6fc800b8e932478dd30e7f3247d910dbacebe741e427a3c38378b10a217edb1')
+b2sums=("25fc978b257f74375504a1639fe2a1c15dcbf089134472fe33e1add1399c4f0b80e497ba898816db6fe2846f81186bbeb1e0ea62f8baa9b806f27db1de70d7c6")
build() {
mkdir -p "${srcdir}/build/"