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-rw-r--r--PKGBUILD51
1 files changed, 51 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=GWENA
+_pkgver=1.6.0
+pkgname=r-${_pkgname,,}
+pkgver=1.6.0
+pkgrel=1
+pkgdesc='Pipeline for augmented co-expression analysis'
+arch=('any')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+ r
+ r-dplyr
+ r-dynamictreecut
+ r-ggplot2
+ r-gprofiler2
+ r-igraph
+ r-magrittr
+ r-matrixstats
+ r-netrep
+ r-purrr
+ r-rcolorbrewer
+ r-rlist
+ r-stringr
+ r-summarizedexperiment
+ r-tibble
+ r-tidyr
+ r-wgcna
+)
+optdepends=(
+ r-biocstyle
+ r-httr
+ r-knitr
+ r-prettydoc
+ r-rmarkdown
+ r-s4vectors
+ r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('3ddc6ff66295600f1bf6ac70909a93e6475d0aa62e1832b5549837f3342b9a81')
+
+build() {
+ R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+ install -dm0755 "${pkgdir}/usr/lib/R/library"
+ cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: