1 files changed, 46 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..8defa11c4352
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,46 @@
+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=Harman
+_pkgver=1.24.0
+pkgname=r-${_pkgname,,}
+pkgver=1.24.0
+pkgrel=1
+pkgdesc='The removal of batch effects from datasets using a PCA and constrained optimisation based technique'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-rcpp
+  r-matrixstats
+  r-ckmeans.1d.dp
+)
+optdepends=(
+  r-affydata
+  r-biocgenerics
+  r-biocstyle
+  r-bladderbatch
+  r-harmandata
+  r-knitr
+  r-limma
+  r-lumi
+  r-minfi
+  r-minfidata
+  r-msmseda
+  r-rcolorbrewer
+  r-rmarkdown
+  r-runit
+  r-sva
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('33e277bca7ae83d037e3eab51aaa86bde28ee9b1d9dece5560806c554d4c96e5')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: