diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 71 |
1 files changed, 71 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..7d93d8a62e4d --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,71 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=MSnbase +_pkgver=2.22.0 +pkgname=r-${_pkgname,,} +pkgver=2.22.0 +pkgrel=1 +pkgdesc='Base Functions and Classes for Mass Spectrometry and Proteomics' +arch=('x86_64') +url="https://bioconductor.org/packages/${_pkgname}" +license=('Artistic2.0') +depends=( + r + r-affy + r-biobase + r-biocgenerics + r-biocparallel + r-digest + r-ggplot2 + r-impute + r-iranges + r-maldiquant + r-mscoreutils + r-mzid + r-mzr + r-pcamethods + r-plyr + r-protgenerics + r-rcpp + r-s4vectors + r-scales + r-vsn + r-xml +) +optdepends=( + r-annotationhub + r-biocstyle + r-gplots + r-gridextra + r-imputelcmd + r-knitr + r-magrittr + r-microbenchmark + r-msdata + r-norm + r-proloc + r-prolocdata + r-pryr + r-rdisop + r-rgl + r-rmarkdown + r-rols + r-roxygen2 + r-rpx + r-shiny + r-summarizedexperiment + r-testthat + r-zoo +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('a38f0232b8aa8b1713cf5f9071447a3a00c1866f0d82b49f61c672c1c604f6f7') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |