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-rw-r--r--PKGBUILD42
1 files changed, 42 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+++ b/PKGBUILD
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+# Maintainer: Pekka Ristola <pekkarr [at] protonmail [dot] com>
+
+_pkgname=orthosData
+_pkgver=1.0.0
+pkgname=r-${_pkgname,,}
+pkgver=${_pkgver//-/.}
+pkgrel=1
+pkgdesc="Data for the orthos package"
+arch=(any)
+url="https://bioconductor.org/packages/${_pkgname}"
+license=(MIT)
+depends=(
+ r-annotationhub
+ r-biocfilecache
+ r-experimenthub
+ r-hdf5array
+ r-stringr
+ r-summarizedexperiment
+)
+optdepends=(
+ r-biocstyle
+ r-ggplot2
+ r-knitr
+ r-rmarkdown
+ r-testthat
+)
+source=("https://bioconductor.org/packages/release/data/experiment/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+md5sums=('7970587455fa5197daf1f6b640b7f688')
+sha256sums=('631be84ad27eea65697c93a491fa96afcde226e05876cb9d644940d5dd9e3b59')
+
+build() {
+ mkdir -p build
+ R CMD INSTALL "$_pkgname" -l build
+}
+
+package() {
+ install -d "$pkgdir/usr/lib/R/library"
+ cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library"
+
+ install -d "$pkgdir/usr/share/licenses/$pkgname"
+ ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname"
+}