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Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 65 |
1 files changed, 65 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..335fb86e245b --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,65 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=PhosR +_pkgver=1.6.0 +pkgname=r-${_pkgname,,} +pkgver=1.6.0 +pkgrel=1 +pkgdesc='A set of methods and tools for comprehensive analysis of phosphoproteomics data' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-biocgenerics + r-circlize + r-dendextend + r-dplyr + r-e1071 + r-ggally + r-ggdendro + r-ggplot2 + r-ggpubr + r-ggtext + r-igraph + r-limma + r-network + r-pcamethods + r-pheatmap + r-preprocesscore + r-rcolorbrewer + r-reshape2 + r-rlang + r-ruv + r-s4vectors + r-summarizedexperiment + r-tidyr +) +optdepends=( + r-annotate + r-biocstyle + r-calibrate + r-cluer + r-directpa + r-knitr + r-org.mm.eg.db + r-org.rn.eg.db + r-reactome.db + r-rgl + r-rmarkdown + r-sna + r-stringr + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('e24af46b24fd6144d042e94b1e09696f91e3d538bbb32a43540b968a0ac9f865') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |