diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..81879ec267a7 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,37 @@ +# system requirements: ncbi-blast+ (see<https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download>) +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=protr +_pkgver=1.6-2 +pkgname=r-${_pkgname,,} +pkgver=1.6.2 +pkgrel=4 +pkgdesc='Generating Various Numerical Representation Schemes for Protein Sequences' +arch=('any') +url="https://cran.r-project.org/package=${_pkgname}" +license=('BSD') +depends=( + r +) +optdepends=( + r-biostrings + r-doparallel + r-foreach + r-gosemsim + r-knitr + r-org.hs.eg.db + r-rmarkdown +) +source=("https://cran.r-project.org/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('56f5db5f4b0f71f59c89dbeb587f422157f014d3261a57a4173c608c278e6f8f') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |