diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 47 |
1 files changed, 47 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..3fa79f8930f7 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,47 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=ReactomeGSA +_pkgver=1.10.0 +pkgname=r-${_pkgname,,} +pkgver=1.10.0 +pkgrel=1 +pkgdesc='Client for the Reactome Analysis Service for comparative multi-omics gene set analysis' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('MIT') +depends=( + r + r-dplyr + r-ggplot2 + r-gplots + r-httr + r-jsonlite + r-progress + r-rcolorbrewer + r-tidyr +) +optdepends=( + r-biobase + r-devtools + r-edger + r-knitr + r-limma + r-reactomegsa.data + r-rmarkdown + r-scater + r-seurat + r-testthat +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('38ea455176b247fc4c6a13fe066a4b4cb1a24ddf1fc57ddae17e30ddf34e86aa') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" + install -Dm644 "${_pkgname}/LICENSE" -t "${pkgdir}/usr/share/licenses/${pkgname}" +} +# vim:set ts=2 sw=2 et: |