diff options
Diffstat (limited to 'PKGBUILD')
-rw-r--r-- | PKGBUILD | 70 |
1 files changed, 70 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..60a78fb10820 --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,70 @@ +# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> + +_pkgname=rrvgo +_pkgver=1.8.0 +pkgname=r-${_pkgname,,} +pkgver=1.8.0 +pkgrel=1 +pkgdesc='Reduce + Visualize GO' +arch=('any') +url="https://bioconductor.org/packages/${_pkgname}" +license=('GPL') +depends=( + r + r-annotationdbi + r-ggplot2 + r-ggrepel + r-go.db + r-gosemsim + r-pheatmap + r-shiny + r-tm + r-treemap + r-wordcloud +) +optdepends=( + r-biocstyle + r-clusterprofiler + r-dose + r-dt + r-heatmaply + r-knitr + r-magrittr + r-org.ag.eg.db + r-org.at.tair.db + r-org.bt.eg.db + r-org.ce.eg.db + r-org.cf.eg.db + r-org.dm.eg.db + r-org.dr.eg.db + r-org.eck12.eg.db + r-org.ecsakai.eg.db + r-org.gg.eg.db + r-org.hs.eg.db + r-org.mm.eg.db + r-org.mmu.eg.db + r-org.pf.plasmo.db + r-org.pt.eg.db + r-org.rn.eg.db + r-org.sc.sgd.db + r-org.ss.eg.db + r-org.xl.eg.db + r-plotly + r-rmarkdown + r-shinydashboard + r-slam + r-testthat + r-utils +) +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") +sha256sums=('7d97ac93d0f076ec5144b2b474e7f2eb7bb6462f31c4255b21f0576851c020e5') + +build() { + R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" +} + +package() { + install -dm0755 "${pkgdir}/usr/lib/R/library" + cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" +} +# vim:set ts=2 sw=2 et: |