diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 34 |
1 files changed, 23 insertions, 11 deletions
@@ -1,19 +1,31 @@ +# Maintainer: Viktor Drobot (aka dviktor) linux776 [at] gmail [dot] com # Contributor: Grey Christoforo <first name at last name dot net> + +_bcname=S4Vectors +_bcver=0.24.3 pkgname=r-s4vectors -_bc_name=S4Vectors -pkgver=0.24.0 +pkgver=${_bcver//[:-]/.} pkgrel=1 -pkgdesc="S4 implementation of vector-like and list-like objects" -url="https://bioconductor.org/packages/release/bioc/html/${_bc_name}.html" -arch=("x86_64") +pkgdesc="Foundation of vector-like and list-like containers in Bioconductor" +url="https://bioconductor.org/packages/release/bioc/html/${_bcname}.html" +arch=(i686 x86_64) license=('Artistic-2.0') -depends=('r' 'r-biocgenerics') -source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bc_name}_${pkgver}.tar.gz") -sha1sums=('9e96c9ff857ae4243d346b66e9281404dc3292c1') +depends=('r>=3.3.0' 'r-biocgenerics>=0.31.1') +makedepends=('gcc') +optdepends=('r-iranges' 'r-genomicranges' 'r-summarizedexperiment' 'r-delayedarray' 'r-shortread' 'r-data.table' 'r-runit' 'r-biocstyle') +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bcname}_${_bcver}.tar.gz") +sha1sums=('f8122844ef2569a1dad3ad10af59638d987b3b2a') + +build(){ + cd "${srcdir}" + + R CMD INSTALL ${_bcname}_${_bcver}.tar.gz -l $srcdir +} package() { - mkdir -p $pkgdir/usr/lib/R/library - cd $srcdir + cd "${srcdir}" - R CMD INSTALL -l $pkgdir/usr/lib/R/library ./${_bc_name} + install -dm0755 "$pkgdir/usr/lib/R/library" + cp -a --no-preserve=ownership "$_bcname" "$pkgdir/usr/lib/R/library" } + |