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Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 19 |
1 files changed, 19 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD new file mode 100644 index 000000000000..51e864d975bc --- /dev/null +++ b/PKGBUILD @@ -0,0 +1,19 @@ +# Contributor: Grey Christoforo <first name at last name dot net> +pkgname=r-shortread +_bc_name=ShortRead +pkgver=1.40.0 +pkgrel=1 +pkgdesc="FASTQ input and manipulation" +url="https://bioconductor.org/packages/release/bioc/html/${_bc_name}.html" +arch=("x86_64") +license=('Artistic-2.0') +depends=('r' 'r-biocgenerics' 'r-biocparallel' 'r-biostrings' 'r-rsamtools' 'r-genomicalignments' 'r-biobase' 'r-s4vectors' 'r-iranges' 'r-genomeinfodb' 'r-genomicranges' 'r-hwriter' 'r-zlibbioc' 'r-latticeextra') +source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_bc_name}_${pkgver}.tar.gz") +sha1sums=('2bf569ce7b65710a90da3688086a056cf68f9e9e') + +package() { + mkdir -p $pkgdir/usr/lib/R/library + cd $srcdir + + R CMD INSTALL -l $pkgdir/usr/lib/R/library ./${_bc_name} +} |