1 files changed, 42 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 000000000000..29f07ad16670
--- /dev/null
+++ b/PKGBUILD
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+# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>
+
+_pkgname=slalom
+_pkgver=1.18.0
+pkgname=r-${_pkgname,,}
+pkgver=1.18.0
+pkgrel=1
+pkgdesc='Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data'
+arch=('x86_64')
+url="https://bioconductor.org/packages/${_pkgname}"
+license=('GPL')
+depends=(
+  r
+  r-bh
+  r-ggplot2
+  r-gseabase
+  r-rcpp
+  r-rcpparmadillo
+  r-rsvd
+  r-singlecellexperiment
+  r-summarizedexperiment
+)
+optdepends=(
+  r-biocstyle
+  r-knitr
+  r-rhdf5
+  r-rmarkdown
+  r-scater
+  r-testthat
+)
+source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
+sha256sums=('c9786dd351795108482c2dc9183ecd184132a9fe1e70f2a822a4cad4083cde13')
+
+build() {
+  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
+}
+
+package() {
+  install -dm0755 "${pkgdir}/usr/lib/R/library"
+  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
+}
+# vim:set ts=2 sw=2 et: