diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 8 |
1 files changed, 4 insertions, 4 deletions
@@ -2,24 +2,24 @@ # Contributor: Markus Heuser <markus.heuser@web.de> pkgname=samtools -pkgver=1.3 +pkgver=1.3.1 pkgrel=1 pkgdesc="tools for manipulating next-generation sequencing data" arch=('i686' 'x86_64') url="http://www.htslib.org/" license=('custom') -depends=('htslib' 'perl') +depends=('htslib') optdepends=('luajit: needed for r2plot.lua vcfutils.lua' 'python2: needed for varfilter.py') options=('staticlibs') source=(https://github.com/samtools/$pkgname/releases/download/$pkgver/$pkgname-$pkgver.tar.bz2) -md5sums=('7ab98b5c988e254d9bb5d796bf9337c9') +md5sums=('a7471aa5a1eb7fc9cc4c6491d73c2d88') prepare() { cd $srcdir/$pkgname-$pkgver # prevent shipped htslib to be used - rm -rf htslib-1.3 + rm -rf htslib-1.3.1 sed -e 's|#!/usr/bin/env python|#!/usr/bin/env python2|' \ -i misc/varfilter.py |