diff options
Diffstat (limited to 'PKGBUILD')
| -rw-r--r-- | PKGBUILD | 11 |
1 files changed, 8 insertions, 3 deletions
@@ -1,8 +1,8 @@ # Maintainer: Philipp A. <flying-sheep@web.de> pkgname=scanpy -pkgver=1.9.1 -pkgrel=2 +pkgver=1.9.3 +pkgrel=1 pkgdesc='Single-Cell Analysis in Python' arch=(any) provides=(scanpy python-scanpy) @@ -29,6 +29,7 @@ depends=( python-sinfo ) optdepends=( + 'python-igraph: PAGA support (also transitively needed for Louvain/Leiden)' 'python-louvain-igraph: Louvain clustering' 'python-leidenalg: leiden community detection' 'python-bbknn: Batch balanced KNN (batch correction)' @@ -38,10 +39,14 @@ optdepends=( 'python-harmonypy: Harmony dataset integration algorithm' 'python-scanorama: Scanorama dataset integration algorithm' 'python-scrublet: Cell doublet detection' + 'rapids-cudf: NVIDIA RAPIDS acceleration' + 'rapids-cuml: NVIDIA RAPIDS acceleration' + 'rapids-cugraph: NVIDIA RAPIDS acceleration' + 'python-dask: Dask parallelization' ) makedepends=(python-flit-core python-setuptools-scm python-build python-installer python-wheel) source=("https://files.pythonhosted.org/packages/source/${pkgname::1}/$pkgname/$pkgname-$pkgver.tar.gz") -sha256sums=('00c9a83b649da7e0171c91e9a08cff632102faa760614fd05cd4d1dbba4eb541') +sha256sums=('dfe65f9acd9f4c1740079a099f89fa6a44b6f0ef75ecaf85247ad4af859144d7') build() { cd "$pkgname-$pkgver" |