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-rw-r--r--PKGBUILD16
1 files changed, 11 insertions, 5 deletions
diff --git a/PKGBUILD b/PKGBUILD
index f879c950fecc..5d94b6ea7d8f 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,7 +1,7 @@
# Maintainer: Christian Krause ("wookietreiber") <kizkizzbangbang@googlemail.com>
pkgname=sga
-pkgver=0.10.13
+pkgver=0.10.14
pkgrel=1
pkgdesc="de novo sequence assembler using string graphs"
arch=('x86_64' 'i686')
@@ -10,20 +10,26 @@ license=('GPL3')
depends=('bamtools' 'jemalloc' 'python')
makedepends=('sparsehash')
source=("$pkgname-$pkgver.tar.gz::https://github.com/jts/sga/archive/v$pkgver.tar.gz"
+ 'set-standard.patch'
'configure-rpath.patch')
-md5sums=('d4f6aefc48c940dba96cc6513649ecdd'
+md5sums=('211edb372898d6515dcde98d17078b7b'
+ 'SKIP'
'SKIP')
prepare() {
- cd $srcdir/$pkgname-$pkgver/src
+ cd $srcdir/$pkgname-$pkgver
+
+ patch -p1 -i $srcdir/set-standard.patch
+ patch -p1 -i $srcdir/configure-rpath.patch
+
+ cd src
- patch -p0 -i $srcdir/configure-rpath.patch
+ ./autogen.sh
}
build() {
cd $srcdir/$pkgname-$pkgver/src
- ./autogen.sh
./configure --prefix=/usr --with-bamtools=/usr --with-jemalloc=/usr
make