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-rw-r--r--PKGBUILD37
1 files changed, 37 insertions, 0 deletions
diff --git a/PKGBUILD b/PKGBUILD
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+# Maintainer: Clint Valentine <valentine.clint@gmail.com>
+
+pkgname='snakemake-git'
+pkgver=4.3.0.79.gbb1a966
+pkgrel=1
+pkgdesc="Python-based language and execution environment for GNU Make-like workflows"
+arch=('any')
+url="https://bitbucket.org/snakemake/snakemake"
+license=('MIT')
+depends=(
+ 'python'
+ 'python-appdirs'
+ 'python-configargparse'
+ 'python-ratelimiter'
+ 'python-requests'
+ 'python-yaml'
+ 'python-wrapt')
+makedepends=('python-setuptools')
+optdepends=(
+ 'graphviz: For DAG visualization'
+ 'python-docutils: For report generation'
+)
+provides=('snakemake')
+conflicts=('snakemake')
+options=(!emptydirs)
+source=("git+https://bitbucket.org/${pkgname//-git/}/${pkgname//-git/}.git")
+md5sums=('SKIP')
+
+pkgver() { # Most recent un-annotated tag from last commit.
+ cd "${srcdir}/${pkgname//-git/}"
+ git describe --long | sed 's/v\([^-]*-g\)/r\1/;s/-/./g' | sed 's/v\d*//g'
+}
+
+package() {
+ cd "${srcdir}/${pkgname//-git/}"
+ python setup.py install --root="${pkgdir}/" --optimize=1
+}