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+3dmod
+3dmodv
+addtostack
+adocxmlconv
+alignframes
+alignlog
+alterheader
+archiveorig
+assemblevol
+autofidseed
+autopatchfit
+avganova
+avgstack
+avgstatplot
+b3dcatfiles
+b3dcopy
+b3dhostname
+b3dremove
+b3dtouch
+b3dwinps
+batchruntomo
+beadtrack
+binvol
+blendmont
+boxavg
+boxstartend
+calc
+ccderaser
+checkmtmod
+checkxforms
+chunksetup
+clip
+clipmodel
+clonemodel
+clonevolume
+collectmmm
+colornewst
+combinefft
+contourmod
+convertmod
+copyheader
+copytomocoms
+corrsearch3d
+cryoposition
+ctfphaseflip
+ctfplotter
+densmatch
+densnorm
+dm2mrc
+dm3props
+dualvolmatch
+echo2
+edgeeraser
+edgemtf
+edgepatches
+edmont
+edpiecepoint
+endmodel
+enhance
+eraser
+etomo
+etomo.jar
+etomoPluginDemo
+excise
+excludeviews
+expandargs
+extposition
+extractmagrad
+extractpieces
+extracttilts
+extstack
+fenestra
+fftrans
+fiberpitch
+filltomo
+filterplot
+findbeads3d
+findcontrast
+finddistort
+findgradient
+findhotpixels
+findsection
+findsirtdiffs
+findwarp
+finishjoin
+fitpatches
+fixboundaries
+fixmont
+flattenwarp
+framewatcher
+genhstplt
+goodframe
+gpumonitor
+gputilttest
+header
+howflared
+idfprocess
+imavgstat
+imod
+imod2meta
+imod2obj
+imod2patch
+imod2rib
+imod2vrml
+imod2vrml2
+imodauto
+imodchopconts
+imodcpuload
+imodcurvature
+imod-dist
+imodexplode
+imodextract
+imodfillin
+imodfindbeads
+imodhelp
+imodinfo
+imodjoin
+imodkillgroup
+imodmesh
+imodmop
+imodpsview
+imodqtassist
+imodsendevent
+imodsetvalues
+imodsortsurf
+imodtrans
+imoduntar
+imodv
+joinmodel
+joinwarp2model
+makecomfile
+makegradtable
+makejoincom
+makepyramid
+MarkersCorrespond
+matchorwarp
+matchrotpairs
+matchshifts
+matchvol
+maxjoinsize
+midas
+model2point
+montagesize
+mrc2tif
+mrcbyte
+mrctaper
+mrcx
+mtdetect
+mtffilter
+mtk
+mtlengths
+mtmodel
+mtoverlap
+mtpairing
+mtrotlong
+mtsmooth
+mtteach
+nad_eed_3d
+nda
+newstack
+numericdiff
+onegenplot
+onepatchcorr
+patch2imod
+patchcorr3d
+patchcrawl3d
+pickbestseed
+point2model
+preNAD
+preNID
+processchunks
+prochunks.csh
+queuechunk
+RAPTOR
+raw2mrc
+rawtiltcoords
+realscalemod
+rec2imod
+recombine
+reducecont
+reducemont
+reducemtmod
+refinematch
+remapmodel
+repackseed
+resamplemod
+restrictalign
+rotatevol
+rotmont
+runimodqtapp
+runraptor
+sampletilt
+scalemodel
+sda
+selfalign
+setlibpath
+settmpdir
+setupcombine
+setupcoms
+setuplong
+setupstitch
+sirtsetup
+slashfindspheres
+slashmasksort
+slurmCleanup.sh
+slurmInit.sh
+smoothsurf
+solvematch
+sortbeadsurfs
+splitblend
+splitcombine
+splitcorrection
+splitmrc
+splittilt
+squeezevol
+startprocess
+stitchalign
+subimage
+subimanova
+subimstat
+subm
+submfg
+subtomosetup
+subtractcurves
+sumdensity
+taperoutvol
+tapervoledge
+tif2mrc
+tilt
+tiltalign
+tiltxcorr
+tomodataplots
+tomopieces
+tomopitch
+tomosnapshot
+tomostitch
+transferfid
+trimvol
+vmstocsh
+vmstopy
+warpvol
+wmod2imod
+xcorrstack
+xf2rotmagstr
+xfalign
+xfforfidless
+xfinterstack
+xfinverse
+xfjointomo
+xfmodel
+xfproduct
+xfsimplex
+xftoxg
+xyzproj