1 files changed, 0 insertions, 92 deletions
diff --git a/r836.patch b/r836.patch
deleted file mode 100644
index b3cc0a96ba5d..000000000000
--- a/r836.patch
+++ /dev/null
@@ -1,92 +0,0 @@
-Index: src/lib/sundials_callbacks.pxi
-===================================================================
---- assimulo/lib/sundials_callbacks.pxi	(revision 835)
-+++ assimulo/lib/sundials_callbacks.pxi	(revision 836)
-@@ -103,7 +103,8 @@
-     Sparse Jacobian function.
-     """
-     cdef ProblemData pData = <ProblemData>problem_data
--    cdef N.ndarray y = nv2arr(yv)
-+    #cdef N.ndarray y = nv2arr(yv)
-+    cdef N.ndarray y = pData.work_y
-     cdef int i
-     cdef int nnz = Jacobian.NNZ
-     cdef int ret_nnz
-@@ -111,7 +112,8 @@
-     cdef realtype* data = Jacobian.data
-     cdef int* rowvals = Jacobian.rowvals
-     cdef int* colptrs = Jacobian.colptrs
--
-+    
-+    nv2arr_inplace(yv, y)
-     """
-         realtype *data;
-         int *rowvals;
-@@ -160,8 +162,11 @@
-     #cdef ndarray[realtype, ndim=2, mode='c'] jac #Used for return from the user function
-     cdef realtype* col_i=DENSE_COL(Jacobian,0)
-     #(<ndarray>pData.y).data =  <realtype*>((<N_VectorContent_Serial>yv.content).data)
--    cdef N.ndarray y = nv2arr(yv)
-+    #cdef N.ndarray y = nv2arr(yv)
-+    cdef N.ndarray y = pData.work_y
-     cdef int i,j
-+    
-+    nv2arr_inplace(yv, y)
- 
-     if pData.dimSens>0: #Sensitivity activated
-         p = realtype2arr(pData.p,pData.dimSens)
-@@ -358,11 +363,16 @@
-     cdef N.ndarray[realtype, ndim=1, mode='c'] res #Used for return from the user function
-     #(<ndarray>pData.y).data  =  <realtype*>((<N_VectorContent_Serial>yv.content).data)
-     #(<ndarray>pData.yd).data =  <realtype*>((<N_VectorContent_Serial>yvdot.content).data)
--    cdef N.ndarray y = nv2arr(yv)
--    cdef N.ndarray yd = nv2arr(yvdot)
-+    cdef N.ndarray y = pData.work_y
-+    cdef N.ndarray yd = pData.work_yd
-+    # cdef N.ndarray y = nv2arr(yv)
-+    # cdef N.ndarray yd = nv2arr(yvdot)
-     cdef realtype* resptr=(<N_VectorContent_Serial>residual.content).data
-     cdef int i
-     
-+    nv2arr_inplace(yv, y)
-+    nv2arr_inplace(yvdot, yd)
-+    
-     if pData.dimSens!=0: #SENSITIVITY 
-         p = realtype2arr(pData.p,pData.dimSens)
-         try:
-@@ -411,10 +421,15 @@
-     cdef realtype* col_i=DENSE_COL(Jacobian,0)
-     #(<ndarray>pData.y).data  =  <realtype*>((<N_VectorContent_Serial>yv.content).data)
-     #(<ndarray>pData.yd).data =  <realtype*>((<N_VectorContent_Serial>yvdot.content).data)
--    cdef N.ndarray y = nv2arr(yv)
--    cdef N.ndarray yd = nv2arr(yvdot)
-+    cdef N.ndarray y = pData.work_y
-+    cdef N.ndarray yd = pData.work_yd
-+    #cdef N.ndarray y = nv2arr(yv)
-+    #cdef N.ndarray yd = nv2arr(yvdot)
-     cdef int i,j
-     
-+    nv2arr_inplace(yv, y)
-+    nv2arr_inplace(yvdot, yd)
-+    
-     if pData.dimSens!=0: #SENSITIVITY 
-         p = realtype2arr(pData.p,pData.dimSens)
-         try:
-@@ -461,10 +476,15 @@
-     cdef N.ndarray[realtype, ndim=1, mode='c'] root #Used for return from the user function
-     #(<ndarray>pData.y).data  =  <realtype*>((<N_VectorContent_Serial>yv.content).data)
-     #(<ndarray>pData.yd).data =  <realtype*>((<N_VectorContent_Serial>yvdot.content).data)
--    cdef N.ndarray y = nv2arr(yv)
--    cdef N.ndarray yd = nv2arr(yvdot)
-+    cdef N.ndarray y = pData.work_y
-+    cdef N.ndarray yd = pData.work_yd
-+    #cdef N.ndarray y = nv2arr(yv)
-+    #cdef N.ndarray yd = nv2arr(yvdot)
-     cdef int i
-     
-+    nv2arr_inplace(yv, y)
-+    nv2arr_inplace(yvdot, yd)
-+    
-     try:
-         if pData.sw != NULL:
-             root=(<object>pData.ROOT)(t,y,yd,<list>pData.sw)  #Call to the Python root function