pkgbase = imod-binary pkgdesc = Image-Processing, Modeling and Display Programs for Tomography and 3D Reconstruction pkgver = 4.12.27 pkgrel = 1 url = https://bio3d.colorado.edu/imod/ arch = x86_64 license = GPL depends = libjpeg6-turbo depends = python optdepends = cuda>=10.1: for library bindings optdepends = java-runtime: for Etomo optdepends = tcsh: for only a few very specializied scripts provides = 3dmod provides = 3dmodv provides = addtostack provides = adocxmlconv provides = alignframes provides = alignlog provides = alterheader provides = archiveorig provides = assemblevol provides = autofidseed provides = autopatchfit provides = avganova provides = avgstack provides = avgstatplot provides = b3dcatfiles provides = b3dcopy provides = b3dhostname provides = b3dremove provides = b3dtouch provides = b3dwinps provides = batchruntomo provides = beadtrack provides = binvol provides = blendmont provides = boxavg provides = boxstartend provides = calc provides = ccderaser provides = checkmtmod provides = checkxforms provides = chunksetup provides = clip provides = clipmodel provides = clonemodel provides = clonevolume provides = collectmmm provides = colornewst provides = combinefft provides = contourmod provides = convertmod provides = copyheader provides = copytomocoms provides = corrsearch3d provides = cryoposition provides = ctfphaseflip provides = ctfplotter provides = densmatch provides = densnorm provides = dm2mrc provides = dm3props provides = dualvolmatch provides = echo2 provides = edgeeraser provides = edgemtf provides = edgepatches provides = edmont provides = edpiecepoint provides = endmodel provides = enhance provides = eraser provides = etomo provides = etomo.jar provides = etomoPluginDemo provides = excise provides = excludeviews provides = expandargs provides = extposition provides = extractmagrad provides = extractpieces provides = extracttilts provides = extstack provides = fenestra provides = fftrans provides = fiberpitch provides = filltomo provides = filterplot provides = findbeads3d provides = findcontrast provides = finddistort provides = findgradient provides = findhotpixels provides = findsection provides = findsirtdiffs provides = findwarp provides = finishjoin provides = fitpatches provides = fixboundaries provides = fixmont provides = flattenwarp provides = framewatcher provides = genhstplt provides = goodframe provides = gpumonitor provides = gputilttest provides = header provides = howflared provides = idfprocess provides = imavgstat provides = imod provides = imod2meta provides = imod2obj provides = imod2patch provides = imod2rib provides = imod2vrml provides = imod2vrml2 provides = imodauto provides = imodchopconts provides = imodcpuload provides = imodcurvature provides = imod-dist provides = imodexplode provides = imodextract provides = imodfillin provides = imodfindbeads provides = imodhelp provides = imodinfo provides = imodjoin provides = imodkillgroup provides = imodmesh provides = imodmop provides = imodpsview provides = imodqtassist provides = imodsendevent provides = imodsetvalues provides = imodsortsurf provides = imodtrans provides = imoduntar provides = imodv provides = joinmodel provides = joinwarp2model provides = makecomfile provides = makegradtable provides = makejoincom provides = makepyramid provides = MarkersCorrespond provides = matchorwarp provides = matchrotpairs provides = matchshifts provides = matchvol provides = maxjoinsize provides = midas provides = model2point provides = montagesize provides = mrc2tif provides = mrcbyte provides = mrctaper provides = mrcx provides = mtdetect provides = mtffilter provides = mtk provides = mtlengths provides = mtmodel provides = mtoverlap provides = mtpairing provides = mtrotlong provides = mtsmooth provides = mtteach provides = nad_eed_3d provides = nda provides = newstack provides = numericdiff provides = onegenplot provides = onepatchcorr provides = patch2imod provides = patchcorr3d provides = patchcrawl3d provides = pickbestseed provides = point2model provides = preNAD provides = preNID provides = processchunks provides = prochunks.csh provides = queuechunk provides = RAPTOR provides = raw2mrc provides = rawtiltcoords provides = realscalemod provides = rec2imod provides = recombine provides = reducecont provides = reducemont provides = reducemtmod provides = refinematch provides = remapmodel provides = repackseed provides = resamplemod provides = restrictalign provides = rotatevol provides = rotmont provides = runimodqtapp provides = runraptor provides = sampletilt provides = scalemodel provides = sda provides = selfalign provides = setlibpath provides = settmpdir provides = setupcombine provides = setupcoms provides = setuplong provides = setupstitch provides = sirtsetup provides = slashfindspheres provides = slashmasksort provides = slurmCleanup.sh provides = slurmInit.sh provides = smoothsurf provides = solvematch provides = sortbeadsurfs provides = splitblend provides = splitcombine provides = splitcorrection provides = splitmrc provides = splittilt provides = squeezevol provides = startprocess provides = stitchalign provides = subimage provides = subimanova provides = subimstat provides = subm provides = submfg provides = subtomosetup provides = subtractcurves provides = sumdensity provides = taperoutvol provides = tapervoledge provides = tif2mrc provides = tilt provides = tiltalign provides = tiltxcorr provides = tomodataplots provides = tomopieces provides = tomopitch provides = tomosnapshot provides = tomostitch provides = transferfid provides = trimvol provides = vmstocsh provides = vmstopy provides = warpvol provides = wmod2imod provides = xcorrstack provides = xf2rotmagstr provides = xfalign provides = xfforfidless provides = xfinterstack provides = xfinverse provides = xfjointomo provides = xfmodel provides = xfproduct provides = xfsimplex provides = xftoxg provides = xyzproj source = https://bio3d.colorado.edu/ftp/latestIMOD/RHEL7-64_CUDA10.1/imod_4.12.27_RHEL7-64_CUDA10.1.sh source = imod.sh sha1sums = 8ac7b7708204b216c9d87ac95ffa436365b05046 sha1sums = d9748aa6447b3d880df50b3507e7d5108106d80d pkgname = imod-binary