# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=AllelicImbalance _pkgver=1.46.1 pkgname=r-${_pkgname,,} pkgver=1.46.1 pkgrel=1 pkgdesc='Investigates Allele Specific Expression' arch=('any') url="https://bioconductor.org/packages/${_pkgname}" license=('GPL') depends=( r r-annotationdbi r-biocgenerics r-biostrings r-bsgenome r-genomeinfodb r-genomicalignments r-genomicfeatures r-genomicranges r-gridextra r-gviz r-iranges r-latticeextra r-rsamtools r-s4vectors r-seqinr r-summarizedexperiment r-variantannotation ) optdepends=( r-biocstyle r-knitr r-org.hs.eg.db r-rmarkdown r-snplocs.hsapiens.dbsnp144.grch37 r-testthat r-txdb.hsapiens.ucsc.hg19.knowngene ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") sha256sums=('1d735339bac1744fc627294da721e064b6d4cce2019fd34b660c4e3210d740ec') build() { R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}" } package() { install -dm0755 "${pkgdir}/usr/lib/R/library" cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library" } # vim:set ts=2 sw=2 et: