# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net> _pkgname=Cepo _pkgver=1.14.0 pkgname=r-${_pkgname,,} pkgver=${_pkgver//-/.} pkgrel=1 pkgdesc="Cepo for the identification of differentially stable genes" arch=(any) url="https://bioconductor.org/packages/$_pkgname" license=('MIT') depends=( r-biocparallel r-delayedarray r-delayedmatrixstats r-dplyr r-ggplot2 r-gseabase r-hdf5array r-patchwork r-purrr r-reshape2 r-rlang r-s4vectors r-singlecellexperiment r-summarizedexperiment ) optdepends=( r-biocstyle r-covr r-escape r-fgsea r-knitr r-pheatmap r-rmarkdown r-scater r-scmerge r-testthat r-upsetr ) source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz") md5sums=('26d6be7e6af55198ba9b8c7965cd7c2f') b2sums=('94083605e9e8b8461bbb2294ee13d4cd642a32ea850c666f3c226fe70caa97f4cd824a4c87ec06bf35c71df52dcd76fbb898db793bfc4ca6fbab7a4d57d1d255') build() { mkdir build R CMD INSTALL -l build "$_pkgname" } package() { install -d "$pkgdir/usr/lib/R/library" cp -a --no-preserve=ownership "build/$_pkgname" "$pkgdir/usr/lib/R/library" install -d "$pkgdir/usr/share/licenses/$pkgname" ln -s "/usr/lib/R/library/$_pkgname/LICENSE" "$pkgdir/usr/share/licenses/$pkgname" }