# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=mdp
_pkgver=1.20.0
pkgname=r-${_pkgname,,}
pkgver=1.20.0
pkgrel=1
pkgdesc='Molecular Degree of Perturbation calculates scores for transcriptome data samples based on their perturbation from controls'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
  r
  r-ggplot2
  r-gridextra
)
optdepends=(
  r-biocmanager
  r-fgsea
  r-knitr
  r-rmarkdown
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('95bba28e2a8f2e3accacafc35381283efea8617d8564aff4a0bd13074ba34a1b')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: