# Maintainer: Guoyi Zhang <guoyizhang at malacology dot net>

_pkgname=TimiRGeN
_pkgver=1.11.0
pkgname=r-${_pkgname,,}
pkgver=1.11.0
pkgrel=1
pkgdesc='Time sensitive microRNA-mRNA integration, analysis and network generation tool'
arch=('any')
url="https://bioconductor.org/packages/${_pkgname}"
license=('GPL')
depends=(
  r
  r-biomart
  r-clusterprofiler
  r-dplyr
  r-freqprof
  r-ggdendro
  r-gghighlight
  r-ggplot2
  r-gplots
  r-gtools
  r-igraph
  r-mfuzz
  r-multiassayexperiment
  r-rcy3
  r-readxl
  r-reshape2
  r-rwikipathways
  r-scales
  r-stringr
  r-tidyr
)
optdepends=(
  r-biocmanager
  r-kableextra
  r-knitr
  r-org.hs.eg.db
  r-org.mm.eg.db
  r-rmarkdown
  r-testthat
)
source=("https://bioconductor.org/packages/release/bioc/src/contrib/${_pkgname}_${_pkgver}.tar.gz")
sha256sums=('22bf75a246dcb1dc85830bdeb9300b00647ae91fe5647d37a6d3d5405b1e9280')

build() {
  R CMD INSTALL ${_pkgname}_${_pkgver}.tar.gz -l "${srcdir}"
}

package() {
  install -dm0755 "${pkgdir}/usr/lib/R/library"
  cp -a --no-preserve=ownership "${_pkgname}" "${pkgdir}/usr/lib/R/library"
}
# vim:set ts=2 sw=2 et: