--- a/src/Makefile 2021-03-26 22:53:48.650299401 -0400 +++ b/src/Makefile 2021-03-26 22:55:11.157618240 -0400 @@ -1,4 +1,5 @@ -CFLAGS=-g -Wall -O3 -std=gnu99 +CFLAGS+=-g -Wall -O3 -std=gnu99 +LDFLAGS+= LIBDIR=../lib BINDIR=../bin LIBS= -lwiggletools -lBigWig -lcurl -lhts -lgsl -lgslcblas -lz -lpthread -lm -llzma -lbz2 @@ -18,7 +19,7 @@ mkdir -p ${LIBDIR} ar rcs ${LIBDIR}/libwiggletools.a *.o -%.o: %.c; ${CC} ${CFLAGS} ${INC} ${CPPFLAGS} ${OPTS} -c $< -o $@ +%.o: %.c; ${CC} ${CFLAGS} ${LDFLAGS} ${INC} ${CPPFLAGS} ${OPTS} -c $< -o $@ clean: rm -Rf *.o *.a wiggletools