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pkgbase = abyss
pkgdesc = Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
pkgver = 2.3.2
pkgrel = 1
url = https://github.com/bcgsc/abyss
arch = i686
arch = x86_64
license = GPL3
makedepends = boost
makedepends = sparsehash
depends = make
depends = openmpi
depends = sqlite
optdepends = pigz: for parallel gzip
optdepends = samtools: to read BAM files
optdepends = zsh: to report time and memory usage
source = abyss-2.3.2.tar.gz::https://github.com/bcgsc/abyss/archive/2.3.2.tar.gz
sha512sums = 6240872cc79e40fcb83ad4aac2ad08c8e763b9b13a12430e3883e269553ebf96239732cd5bea6dd43fbd9c0f5756ec5d0d393d932dac49f359ebb6fa20594457
pkgname = abyss
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