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pkgbase = abyss
pkgdesc = Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler
pkgver = 2.3.6
pkgrel = 1
url = https://github.com/bcgsc/abyss
arch = i686
arch = x86_64
license = GPL3
makedepends = boost
makedepends = sparsehash
depends = make
depends = openmpi
depends = sqlite
optdepends = pigz: for parallel gzip
optdepends = samtools: to read BAM files
optdepends = zsh: to report time and memory usage
source = abyss-2.3.6.tar.gz::https://github.com/bcgsc/abyss/archive/2.3.6.tar.gz
sha512sums = bc535f2676f6ed9929219680fb301787bffa527892c46f96c10d4e998cd7a7cf88df689f04e3bb4333d4a8ec7f098f6bd45b1a0e20877674d003c7f57eca5268
pkgname = abyss
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