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pkgbase = cdd
pkgdesc = The Conserved Domain Database is a resource for the annotation of functional units in proteins. Its collection of domain models includes a set curated by NCBI, which utilizes 3D structure to provide insights into sequence/structure/function relationships.
pkgver = 2018.april.2
pkgrel = 1
url = ftp://ftp.ncbi.nih.gov
arch = any
license = public domain
makedepends = bash
noextract = Cdd_LE.tar.gz
noextract = Cdd_NCBI_LE.tar.gz
noextract = Cog_LE.tar.gz
noextract = Kog_LE.tar.gz
noextract = Pfam_LE.tar.gz
noextract = Prk_LE.tar.gz
noextract = Smart_LE.tar.gz
noextract = Tigr_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/bitscore_specific_3.16.txt
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd00030_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd00180_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd00838_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd00882_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd01391_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd01659_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd02039_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd04509_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cd05188_notree.acd
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cdd.info
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cdd.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cdd.versions
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cddannot.dat.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cddannot_generic.dat.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cddid.tbl.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cddid_all.tbl.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cddmasters.fa.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/cdtrack.txt
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/family_superfamily_links
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/fasta.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Cdd_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Cdd_NCBI_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Cog_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Kog_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Pfam_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Prk_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Smart_LE.tar.gz
source = ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/little_endian/Tigr_LE.tar.gz
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
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md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
md5sums = SKIP
pkgname = cdd
|